Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: k02437

[Submit comment/correction]

Locus	k02437
Type	CAPS
Chromosome	4H
Map	Hv-HNxH602-4H 17.5
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags20c22
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 6 ] Restriction enzyme used for CAPS analysis = TspRI SNP = A/G SNP structure (UNICODE) = TTAGTAAGCARTGATGAAGAG Parent 1 SNP sequence = TTAGTAAGCAATGATGAAGAG Parent 2 SNP sequence = TTAGTAAGCAGTGATGAAGAG Recognized sequence for CAPs locus = CASTGNN
Probe for Locus	bags20c22
Locus	k02437
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - ATCTTCCTTCGTTGCATTGG Right 5' - CACTAGCTCCCAGAGCATCC
Sequence	AV833976
PCR size	485