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GrainGenes Marker Report: k02456

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Locus	k02456
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 146.8
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags20o24
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 12 ] SNP = T/A SNP structure (UNICODE) = TGTCAACTCAWCTTAGTGTCG Parent 1 SNP sequence = TGTCAACTCATCTTAGTGTCG Parent 2 SNP sequence = TGTCAACTCAACTTAGTGTCG SNP = A/C SNP structure (UNICODE) = TCTACATAGAMTGTACTAGCT Parent 1 SNP sequence = TCTACATAGAATGTACTAGCT Parent 2 SNP sequence = TCTACATAGACTGTACTAGCT SNP = T/C SNP structure (UNICODE) = CAATCGACAGYGGCTCCAGGG Parent 1 SNP sequence = CAATCGACAGTGGCTCCAGGG Parent 2 SNP sequence = CAATCGACAGCGGCTCCAGGG
Probe for Locus	bags20o24
Locus	k02456
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = cullin-like protein [Oryza sativa (japonica cultivar-group)] dbj BAB64732.1 cullin-like protein [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - GTGACATGGTTCACACAGGC Right 5' - TGGCTGTGTTGGAGTTTGAG
Sequence	AV918401
PCR size	447