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GrainGenes Marker Report: k02585

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Locus	k02585
Type	CAPS
Chromosome	1H
Map	Hv-HNxH602-1H 136.3
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags22f12
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 6 ] Restriction enzyme used for CAPS analysis = TaqI SNP = C/G SNP structure (UNICODE) = CGCCGGATTCSATGCTGCTGC Parent 1 SNP sequence = CGCCGGATTCCATGCTGCTGC Parent 2 SNP sequence = CGCCGGATTCGATGCTGCTGC Recognized sequence for CAPs locus = TCGA
Probe for Locus	bags22f12
Locus	k02585
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - GAGAAACAATGTCGCAGCAA Right 5' - AAGGGCCTGTACAAGGGGT
Sequence	AV918810
PCR size	424