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GrainGenes Marker Report: k02587

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Locus	k02587
Type	SNP
Chromosome	4H
Map	Hv-HNxH602-4H 249
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags22k17
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = A/G SNP structure (UNICODE) = AAACACAGCTRCTAAAATAAG Parent 1 SNP sequence = AAACACAGCTACTAAAATAAG Parent 2 SNP sequence = AAACACAGCTGCTAAAATAAG SNP = G/A SNP structure (UNICODE) = TCTAATAATTRATTCGCTTCA Parent 1 SNP sequence = TCTAATAATTGATTCGCTTCA Parent 2 SNP sequence = TCTAATAATTAATTCGCTTCA
Probe for Locus	bags22k17
Locus	k02587
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative calcineurin [Oryza sativa (japonica cultivar-group)] gb AAG60198.1 putative calcineurin [Oryza sativa]
Type	PCR
PCR primers	Left 5' - AAACACGGGCCAATAAACAA Right 5' - TGATGGTGCCAAATCAGATG
Sequence	AV913603
PCR size	357