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GrainGenes Marker Report: k02732

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Locus	k02732
Type	SNP
Chromosome	7H
Map	Hv-HNxH602-7H 71.5
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags28k04
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 12 ] SNP = T/G SNP structure (UNICODE) = CAGCGTGCGGKATGCCACATC Parent 1 SNP sequence = CAGCGTGCGGTATGCCACATC Parent 2 SNP sequence = CAGCGTGCGGGATGCCACATC SNP = T/C SNP structure (UNICODE) = CATCCTTTTAYGTTGATTCAT Parent 1 SNP sequence = CATCCTTTTATGTTGATTCAT Parent 2 SNP sequence = CATCCTTTTACGTTGATTCAT SNP = C/A SNP structure (UNICODE) = TGCTTGCCCAMCAGCAGCGCC Parent 1 SNP sequence = TGCTTGCCCACCAGCAGCGCC Parent 2 SNP sequence = TGCTTGCCCAACAGCAGCGCC
Probe for Locus	bags28k04
Locus	k02732
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = F22M8.8 protein - Arabidopsis thaliana gb AAF76473.1 Contains similarity to a kinesin homolog from Arabidopsis thaliana
Type	PCR
PCR primers	Left 5' - CATGAACGGAAGCAAGGATT Right 5' - GGGAGCATAAGCAGCTCAAC
Sequence	BJ466085
PCR size	355