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GrainGenes Marker Report: k02746

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Locus	k02746
Type	SNP
Chromosome	7H
Map	Hv-HNxH602-7H 162.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags29b09
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 12 ] SNP = G/T SNP structure (UNICODE) = TATCATAATTKGGGCTTGCAT Parent 1 SNP sequence = TATCATAATTGGGGCTTGCAT Parent 2 SNP sequence = TATCATAATTTGGGCTTGCAT SNP = G/C SNP structure (UNICODE) = TAGTGTCGCASTAGATGCTGC Parent 1 SNP sequence = TAGTGTCGCAGTAGATGCTGC Parent 2 SNP sequence = TAGTGTCGCACTAGATGCTGC SNP = A/G SNP structure (UNICODE) = ATCCAAGTATRAGAGCCACCA Parent 1 SNP sequence = ATCCAAGTATAAGAGCCACCA Parent 2 SNP sequence = ATCCAAGTATGAGAGCCACCA
Probe for Locus	bags29b09
Locus	k02746
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = unknown protein [Oryza sativa (japonica cultivar-group)] gb AAM54151.1 unknown protein [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - TCTCCACTCCCCAGTACCAG Right 5' - CACTGATATCTCCGGATGCC
Sequence	BJ467620
PCR size	364