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GrainGenes Marker Report: k02766

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Locus	k02766
Type	SNP
Chromosome	3H
Map	Hv-HNxH602-3H 300.4
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags27p13
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 12 ] SNP = C/T SNP structure (UNICODE) = GCTATTTTGCYGTTCTCAACA Parent 1 SNP sequence = GCTATTTTGCCGTTCTCAACA Parent 2 SNP sequence = GCTATTTTGCTGTTCTCAACA SNP = A/G SNP structure (UNICODE) = TCAACAGAGTRTAAACGATAA Parent 1 SNP sequence = TCAACAGAGTATAAACGATAA Parent 2 SNP sequence = TCAACAGAGTGTAAACGATAA SNP = T/C SNP structure (UNICODE) = AAACCCATCTYCATACATCAG Parent 1 SNP sequence = AAACCCATCTTCATACATCAG Parent 2 SNP sequence = AAACCCATCTCCATACATCAG
Probe for Locus	bags27p13
Locus	k02766
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = P0518C01.32 [Oryza sativa (japonica cultivar-group)] dbj BAB63693.1 P0518C01.32 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - GTCAGTTCAGGAGCGCCTAC Right 5' - CTGCTACAAGGAGGTGGTGC
Sequence	BJ465939
PCR size	372