GrainGenes Marker Report: k02854
Locus
k02854
Type
SNP
Chromosome
6H
Map
Hv-HNxH602-6H 102.3
[ Show Nearby Loci ]
Map Data
Barley, HN x H602, Sato2009
Species
Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe
bags30o05
Reference
Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark
[ Hide all but 1 of 7 ] SNP = C/T SNP structure (UNICODE) = TTGGAGGAACYTGCGGGTCGA Parent 1 SNP sequence = TTGGAGGAACCTGCGGGTCGA Parent 2 SNP sequence = TTGGAGGAACTTGCGGGTCGA SNP structure (UNICODE) = AAAGATCGCAYGCCACACCAT Parent 1 SNP sequence = AAAGATCGCACGCCACACCAT Parent 2 SNP sequence = AAAGATCGCATGCCACACCAT
Probe for Locus
bags30o05
Locus
k02854
Reference
Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks
Best BLAST Hit = fumarylacetoacetase, putative [Arabidopsis thaliana] gb AAM16166.1 At1g12050/F12F1_8 [Arabidopsis thaliana]
Type
PCR
PCR primers
Left 5' - CGCGTAATTTTACACCCACA
Right 5' - TCAGTTCTTCAGGGATTCGC
Sequence
BJ549117
PCR size
412
GrainGenes Marker Report: k02854
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