Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: k02897

[Submit comment/correction]

Locus	k02897
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 272.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags31o13
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 16 ] SNP = G/C SNP structure (UNICODE) = TTGTGCAAAGSAAGGACAACT Parent 1 SNP sequence = TTGTGCAAAGGAAGGACAACT Parent 2 SNP sequence = TTGTGCAAAGCAAGGACAACT SNP = T/C SNP structure (UNICODE) = ACTAGCGGGTYGCTACACCGG Parent 1 SNP sequence = ACTAGCGGGTTGCTACACCGG Parent 2 SNP sequence = ACTAGCGGGTCGCTACACCGG SNP = T/G SNP structure (UNICODE) = GCTAACTATAKCATACAAGAG Parent 1 SNP sequence = GCTAACTATATCATACAAGAG Parent 2 SNP sequence = GCTAACTATAGCATACAAGAG SNP = C/T SNP structure (UNICODE) = CCGACGTCGTYGGCGGGAGGA Parent 1 SNP sequence = CCGACGTCGTCGGCGGGAGGA Parent 2 SNP sequence = CCGACGTCGTTGGCGGGAGGA
Probe for Locus	bags31o13
Locus	k02897
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - CCAAACAAAACAGCACATGG Right 5' - GAGGGAACATCCTACAGCCA
Sequence	BJ466392
PCR size	387