Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: k02936

[Submit comment/correction]

Locus	k02936
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 299.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags32m15
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 14 ] SNP = A/G SNP structure (UNICODE) = TATGATTGACRCTACGACTTT Parent 1 SNP sequence = TATGATTGACACTACGACTTT Parent 2 SNP sequence = TATGATTGACGCTACGACTTT SNP structure (UNICODE) = ATGACCATCCRGTGGGGTAGT Parent 1 SNP sequence = ATGACCATCCAGTGGGGTAGT Parent 2 SNP sequence = ATGACCATCCGGTGGGGTAGT SNP structure (UNICODE) = TCATGCTTGARACGGTGCAGA Parent 1 SNP sequence = TCATGCTTGAAACGGTGCAGA Parent 2 SNP sequence = TCATGCTTGAGACGGTGCAGA SNP = G/T SNP structure (UNICODE) = GACTTCAAGGKGGTTCCACAA Parent 1 SNP sequence = GACTTCAAGGGGGTTCCACAA Parent 2 SNP sequence = GACTTCAAGGTGGTTCCACAA
Probe for Locus	bags32m15
Locus	k02936
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = 3-beta-glucuronosyltransferase [Hordeum vulgare]
Type	PCR
PCR primers	Left 5' - AATAGCGTGAGTCCCACCAC Right 5' - GGAGCAGTCAACTGTCAGCA
Sequence	BJ483722
PCR size	351