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GrainGenes Marker Report: k02987

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Locus	k02987
Type	SNP
Chromosome	7H
Map	Hv-HNxH602-7H 180.1
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags35k06
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = T/G SNP structure (UNICODE) = GAGAAGGAGGKTTGCTGATGG Parent 1 SNP sequence = GAGAAGGAGGTTTGCTGATGG Parent 2 SNP sequence = GAGAAGGAGGGTTGCTGATGG SNP = A/G SNP structure (UNICODE) = CTAAGGAAAARCATACCTAGT Parent 1 SNP sequence = CTAAGGAAAAACATACCTAGT Parent 2 SNP sequence = CTAAGGAAAAGCATACCTAGT
Probe for Locus	bags35k06
Locus	k02987
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = coclaurine N-methyltransferase [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - GATTGGTTCTTGTAGGGCGA Right 5' - TGGCAAAGGCTATGCTTTCT
Sequence	BJ467025
PCR size	438