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GrainGenes Marker Report: k03041

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Locus	k03041
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 75.2
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags34f05
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = C/A SNP structure (UNICODE) = AGTGATGCCTMCTGAGACGCA Parent 1 SNP sequence = AGTGATGCCTCCTGAGACGCA Parent 2 SNP sequence = AGTGATGCCTACTGAGACGCA SNP = A/G SNP structure (UNICODE) = CGCCTACGTCRGGCAGGCCTA Parent 1 SNP sequence = CGCCTACGTCAGGCAGGCCTA Parent 2 SNP sequence = CGCCTACGTCGGGCAGGCCTA
Probe for Locus	bags34f05
Locus	k03041
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = expressed protein [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - ATCTCATAACTTGCTGCCCC Right 5' - CCAATATCCCTCTTGGCTCA
Sequence	BJ466831
PCR size	404