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GrainGenes Marker Report: k03092

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Locus	k03092
Type	SNP
Chromosome	6H
Map	Hv-HNxH602-6H 121.7
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags37o24
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 11 ] SNP = G/A SNP structure (UNICODE) = ACACAAAACARAGCAAATGTG Parent 1 SNP sequence = ACACAAAACAGAGCAAATGTG Parent 2 SNP sequence = ACACAAAACAAAGCAAATGTG SNP = G/T SNP structure (UNICODE) = TTAAGTTCTAKCTGATTGAAA Parent 1 SNP sequence = TTAAGTTCTAGCTGATTGAAA Parent 2 SNP sequence = TTAAGTTCTATCTGATTGAAA SNP structure (UNICODE) = CGGACATGTARCTGTATCAAC Parent 1 SNP sequence = CGGACATGTAGCTGTATCAAC Parent 2 SNP sequence = CGGACATGTAACTGTATCAAC
Probe for Locus	bags37o24
Locus	k03092
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = 60S ribosomal protein L31 gb AAA80638.1 ribosomal protein L31
Type	PCR
PCR primers	Left 5' - AGCAAGCATCCAATCCATTC Right 5' - ATACTGTGATACGGCACCCC
Sequence	BJ468268
PCR size	387