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GrainGenes Marker Report: k03164

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Locus	k03164
Type	CAPS
Chromosome	3H
Map	Hv-HNxH602-3H 148.2
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags38b06
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 6 ] Restriction enzyme used for CAPS analysis = MseI SNP = T/G SNP structure (UNICODE) = TTGCGACGTTKAAGATATTCG Parent 1 SNP sequence = TTGCGACGTTTAAGATATTCG Parent 2 SNP sequence = TTGCGACGTTGAAGATATTCG Recognized sequence for CAPs locus = TTAA
Probe for Locus	bags38b06
Locus	k03164
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - CTCTTGCACGGTTGCATCTA Right 5' - TGATTTCTCGGGATTTGACC
Sequence	BJ468294
PCR size	452