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GrainGenes Marker Report: k03193

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Locus	k03193
Type	SNP
Chromosome	4H
Map	Hv-HNxH602-4H 109.3
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags38l18
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = A/C SNP structure (UNICODE) = CATCTAAAGAMAAATGATGCT Parent 1 SNP sequence = CATCTAAAGAAAAATGATGCT Parent 2 SNP sequence = CATCTAAAGACAAATGATGCT SNP = G/A SNP structure (UNICODE) = TGATGATGACRGTGATGACGG Parent 1 SNP sequence = TGATGATGACGGTGATGACGG Parent 2 SNP sequence = TGATGATGACAGTGATGACGG
Probe for Locus	bags38l18
Locus	k03193
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = unnamed protein product [Lotus corniculatus var. japonicus]
Type	PCR
PCR primers	Left 5' - ATAAATGACTCGCTCGGTGC Right 5' - CAGGAACTCCTCAAAGCCAG
Sequence	BJ549907
PCR size	495