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GrainGenes Marker Report: k03296

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Locus	k03296
Type	SNP
Chromosome	3H
Map	Hv-HNxH602-3H 150.4
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags4p14
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 16 ] SNP = T/G SNP structure (UNICODE) = TGATAGTTCAKATACAAAACA Parent 1 SNP sequence = TGATAGTTCATATACAAAACA Parent 2 SNP sequence = TGATAGTTCAGATACAAAACA SNP = A/G SNP structure (UNICODE) = CCTGTGTGCARCCCAAAAACA Parent 1 SNP sequence = CCTGTGTGCAACCCAAAAACA Parent 2 SNP sequence = CCTGTGTGCAGCCCAAAAACA SNP = A/T SNP structure (UNICODE) = ATAAAATTTGWACTAACGTAG Parent 1 SNP sequence = ATAAAATTTGAACTAACGTAG Parent 2 SNP sequence = ATAAAATTTGTACTAACGTAG SNP = C/T SNP structure (UNICODE) = GCTAGAGAAGYCAACAAGTAG Parent 1 SNP sequence = GCTAGAGAAGCCAACAAGTAG Parent 2 SNP sequence = GCTAGAGAAGTCAACAAGTAG
Probe for Locus	bags4p14
Locus	k03296
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - TGACACGTGCCAATCTCAAT Right 5' - GCAAAGATGATCCAAGGGAA
Sequence	AV834137
PCR size	374