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GrainGenes Marker Report: k03299

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Locus	k03299
Type	CAPS
Chromosome	2H
Map	Hv-HNxH602-2H 354.8
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags5m04
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 6 ] Restriction enzyme used for CAPS analysis = ClaI SNP = T/C SNP structure (UNICODE) = AGCCTGCAATYGATATCACTC Parent 1 SNP sequence = AGCCTGCAATTGATATCACTC Parent 2 SNP sequence = AGCCTGCAATCGATATCACTC Recognized sequence for CAPs locus = ATCGAT
Probe for Locus	bags5m04
Locus	k03299
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - CTGTTGCTTCCGCCAGTAGT Right 5' - GGCAAGATTAGGCTGCTGTT
Sequence	AV834171
PCR size	377