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GrainGenes Marker Report: k03308

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Locus	k03308
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 44.6
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags4p16
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = G/C SNP structure (UNICODE) = CCKTTCCTTCSTGCGTATGCT Parent 1 SNP sequence = CCGTTCCTTCGTGCGTATGCT Parent 2 SNP sequence = CCTTTCCTTCCTGCGTATGCT SNP = G/T SNP structure (UNICODE) = TTGCTCCACCKTTCCTTCSTG Parent 1 SNP sequence = TTGCTCCACCGTTCCTTCGTG Parent 2 SNP sequence = TTGCTCCACCTTTCCTTCCTG
Probe for Locus	bags4p16
Locus	k03308
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = B1160F02.7 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - TAGCCTGGCAGCTTTCTGTT Right 5' - CTACTTCCCCCGTTTCGAC
Sequence	AV919200
PCR size	419