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GrainGenes Marker Report: k03358

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Locus	k03358
Type	SNP
Chromosome	7H
Map	Hv-HNxH602-7H 217.7
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags5l04
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 12 ] SNP = G/A SNP structure (UNICODE) = TCACATACCCRGCACCGGGAA Parent 1 SNP sequence = TCACATACCCGGCACCGGGAA Parent 2 SNP sequence = TCACATACCCAGCACCGGGAA SNP = T/G SNP structure (UNICODE) = TCCGCCATTTKGTTCGAATGC Parent 1 SNP sequence = TCCGCCATTTTGTTCGAATGC Parent 2 SNP sequence = TCCGCCATTTGGTTCGAATGC SNP = T/C SNP structure (UNICODE) = AGCACCCGCAYCATTTAGCAG Parent 1 SNP sequence = AGCACCCGCATCATTTAGCAG Parent 2 SNP sequence = AGCACCCGCACCATTTAGCAG
Probe for Locus	bags5l04
Locus	k03358
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = C2H2 zinc-finger protein [Zea mays]
Type	PCR
PCR primers	Left 5' - ATCATCGTCATCGTCAGCAA Right 5' - GGTTGTGCAAGTGAGGTTCA
Sequence	AV919356
PCR size	361