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GrainGenes Marker Report: k03367

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Locus	k03367
Type	SNP
Chromosome	3H
Map	Hv-HNxH602-3H 119.8
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags7b20
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 12 ] SNP = G/C SNP structure (UNICODE) = TTAGAACTTASGCATGCAATG Parent 1 SNP sequence = TTAGAACTTAGGCATGCAATG Parent 2 SNP sequence = TTAGAACTTACGCATGCAATG SNP = C/T SNP structure (UNICODE) = CCTGGTATTTYGCTATCAGAA Parent 1 SNP sequence = CCTGGTATTTCGCTATCAGAA Parent 2 SNP sequence = CCTGGTATTTTGCTATCAGAA SNP = A/C SNP structure (UNICODE) = TTGTTTCAGAMAGACTTAGTA Parent 1 SNP sequence = TTGTTTCAGAAAGACTTAGTA Parent 2 SNP sequence = TTGTTTCAGACAGACTTAGTA
Probe for Locus	bags7b20
Locus	k03367
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = P0684B02.17 [Oryza sativa (japonica cultivar-group)] dbj BAB44030.1 P0684B02.17 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - TTCAATGCAGGCGATGATTA Right 5' - CTGTGCTCTTCCTCTCGCTC
Sequence	AV919675
PCR size	384