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GrainGenes Marker Report: k03415

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Locus	k03415
Type	SNP
Chromosome	6H
Map	Hv-HNxH602-6H 173
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags7d17
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 30 ] SNP = G/A SNP structure (UNICODE) = CATGGTGTCARCTTTAATATA Parent 1 SNP sequence = CATGGTGTCAGCTTTAATATA Parent 2 SNP sequence = CATGGTGTCAACTTTAATATA SNP = T/C SNP structure (UNICODE) = GCAAGCTTGTYAGGTTAAACT Parent 1 SNP sequence = GCAAGCTTGTTAGGTTAAACT Parent 2 SNP sequence = GCAAGCTTGTCAGGTTAAACT SNP = A/G SNP structure (UNICODE) = ACTTGTACAARGGCAAGCTTG Parent 1 SNP sequence = ACTTGTACAAAGGCAAGCTTG Parent 2 SNP sequence = ACTTGTACAAGGGCAAGCTTG SNP = C/T SNP structure (UNICODE) = CTTTAATATAYGCTCGAAGCA Parent 1 SNP sequence = CTTTAATATACGCTCGAAGCA Parent 2 SNP sequence = CTTTAATATATGCTCGAAGCA SNP structure (UNICODE) = CTATCATCTCRGAAATGTTTG Parent 1 SNP sequence = CTATCATCTCGGAAATGTTTG Parent 2 SNP sequence = CTATCATCTCAGAAATGTTTG SNP = T/A SNP structure (UNICODE) = TTGCCTGTGAWGTCTATCTTG Parent 1 SNP sequence = TTGCCTGTGATGTCTATCTTG Parent 2 SNP sequence = TTGCCTGTGAAGTCTATCTTG SNP = C/G SNP structure (UNICODE) = CTAATCTGCASCTCTGCTTTG Parent 1 SNP sequence = CTAATCTGCACCTCTGCTTTG Parent 2 SNP sequence = CTAATCTGCAGCTCTGCTTTG SNP structure (UNICODE) = GAAATGTTTGYTGGCAGCATG Parent 1 SNP sequence = GAAATGTTTGCTGGCAGCATG Parent 2 SNP sequence = GAAATGTTTGTTGGCAGCATG
Probe for Locus	bags7d17
Locus	k03415
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - CTTCACCGGCTCGTAGATTC Right 5' - TGAGAAGGGAGAGAAGCAGC
PCR size	394