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GrainGenes Marker Report: k03428

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Locus	k03428
Type	SNP
Chromosome	7H
Map	Hv-HNxH602-7H 218.3
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags7g10
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = C/T SNP structure (UNICODE) = TGTAGGTTTCYGCCTCATCAG Parent 1 SNP sequence = TGTAGGTTTCCGCCTCATCAG Parent 2 SNP sequence = TGTAGGTTTCTGCCTCATCAG SNP = A/G SNP structure (UNICODE) = AACAATACACRACCCTATTTG Parent 1 SNP sequence = AACAATACACAACCCTATTTG Parent 2 SNP sequence = AACAATACACGACCCTATTTG
Probe for Locus	bags7g10
Locus	k03428
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = subtilisin-like serine protease [Arabidopsis thaliana] pir T00538 probable serine proteinase At2g19170 [imported] - Arabidopsis
Type	PCR
PCR primers	Left 5' - TTAGATTGGATCGGAGGGAG Right 5' - CATTTGCCGTCTGAACATTG
Sequence	AV919743
PCR size	421