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GrainGenes Marker Report: k03450

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Locus	k03450
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 15.4
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags7b16
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = T/C SNP structure (UNICODE) = TCGTCACTGTYGCAAATCATA Parent 1 SNP sequence = TCGTCACTGTTGCAAATCATA Parent 2 SNP sequence = TCGTCACTGTCGCAAATCATA SNP = T/G SNP structure (UNICODE) = AGGACACTGTKACAGGTTAAG Parent 1 SNP sequence = AGGACACTGTTACAGGTTAAG Parent 2 SNP sequence = AGGACACTGTGACAGGTTAAG
Probe for Locus	bags7b16
Locus	k03450
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = OSJNBa0019G23.5 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - AAGAAAACAAACGCATGGCT Right 5' - CAAGGAGAAGGAGAACGACG
Sequence	AV919673
PCR size	380