Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: k03469

[Submit comment/correction]

Locus	k03469
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 303.5
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags9b02
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = G/A SNP structure (UNICODE) = ATGGCATACARTCTGCGCAAC Parent 1 SNP sequence = ATGGCATACAGTCTGCGCAAC Parent 2 SNP sequence = ATGGCATACAATCTGCGCAAC SNP = C/A SNP structure (UNICODE) = TATTTTTCCAMAAATAAATAT Parent 1 SNP sequence = TATTTTTCCACAAATAAATAT Parent 2 SNP sequence = TATTTTTCCAAAAATAAATAT
Probe for Locus	bags9b02
Locus	k03469
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = P0705A05.20 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - CTAGGACGGTGCATCCATTT Right 5' - GTTGAGTATGCGCTTCGTGA
Sequence	AV920049
PCR size	448