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GrainGenes Marker Report: k03631

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Locus	k03631
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 109.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bah14i07
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 12 ] SNP = T/A SNP structure (UNICODE) = AGCCGGAAGAWAATAACATGA Parent 1 SNP sequence = AGCCGGAAGATAATAACATGA Parent 2 SNP sequence = AGCCGGAAGAAAATAACATGA SNP = C/T SNP structure (UNICODE) = TCAAGAATCGYCTTTGGGGGT Parent 1 SNP sequence = TCAAGAATCGCCTTTGGGGGT Parent 2 SNP sequence = TCAAGAATCGTCTTTGGGGGT SNP = C/A SNP structure (UNICODE) = GGTGTTTGGAMCCAATACCAN Parent 1 SNP sequence = GGTGTTTGGACCCAATACCAN Parent 2 SNP sequence = GGTGTTTGGAACCAATACCAN
Probe for Locus	bah14i07
Locus	k03631
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = unknown protein [Oryza sativa]
Type	PCR
PCR primers	Left 5' - CTGATGGAAAAGCGCAATCT Right 5' - CGAAGCTTGTCTGCCACATA
Sequence	AV942878
PCR size	357