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GrainGenes Marker Report: k03670

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Locus	k03670
Type	SNP
Chromosome	3H
Map	Hv-HNxH602-3H 103.4
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bah19c13
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 12 ] SNP = G/C SNP structure (UNICODE) = AATGGTAGTGSTTTGGGAAAA Parent 1 SNP sequence = AATGGTAGTGGTTTGGGAAAA Parent 2 SNP sequence = AATGGTAGTGCTTTGGGAAAA SNP = C/T SNP structure (UNICODE) = TGTGCTTCAAYTTCCTCGTCA Parent 1 SNP sequence = TGTGCTTCAACTTCCTCGTCA Parent 2 SNP sequence = TGTGCTTCAATTTCCTCGTCA SNP = A/C SNP structure (UNICODE) = GATCATCATAMGCAACAGGCA Parent 1 SNP sequence = GATCATCATAAGCAACAGGCA Parent 2 SNP sequence = GATCATCATACGCAACAGGCA
Probe for Locus	bah19c13
Locus	k03670
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = expressed protein [Arabidopsis thaliana] dbj BAB02826.1 unnamed protein product [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - ATTTGCCTCCTGCTCATCTG Right 5' - GACTGACCTGTTAGTCCGGG
Sequence	AV835762
PCR size	350