GrainGenes Marker Report: k03791
Locus
k03791
Type
SNP
Chromosome
1H
Map
Hv-HNxH602-1H 232.6
[ Show Nearby Loci ]
Map Data
Barley, HN x H602, Sato2009
Species
Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe
bah23i02
Reference
Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark
[ Hide all but 1 of 7 ] SNP = C/G SNP structure (UNICODE) = AGAATGGCGASATTAGAAATA Parent 1 SNP sequence = AGAATGGCGACATTAGAAATA Parent 2 SNP sequence = AGAATGGCGAGATTAGAAATA SNP structure (UNICODE) = CCTGGCCGCGSGACCTTTATA Parent 1 SNP sequence = CCTGGCCGCGCGACCTTTATA Parent 2 SNP sequence = CCTGGCCGCGGGACCTTTATA
Probe for Locus
bah23i02
Locus
k03791
Reference
Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks
Best BLAST Hit = putative beta-1,3-glucanase [Oryza sativa (japonica cultivar-group)]
Type
PCR
PCR primers
Left 5' - CTCATTGCGGGTTACCAGTT
Right 5' - CCAGCAATGCCATATCCTCT
Sequence
AJ434433
PCR size
353
GrainGenes Marker Report: k03791
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