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GrainGenes Marker Report: k03799

Locus	k03799
Type	SNP
Chromosome	6H
Map	Hv-HNxH602-6H 38.1
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bah22c08
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 26 ] SNP = G/A SNP structure (UNICODE) = CCACTCCCATRGTTAAATGTA Parent 1 SNP sequence = CCACTCCCATGGTTAAATGTA Parent 2 SNP sequence = CCACTCCCATAGTTAAATGTA SNP = A/C SNP structure (UNICODE) = TTCTGTGTTAMAGCTTCTTAC Parent 1 SNP sequence = TTCTGTGTTAAAGCTTCTTAC Parent 2 SNP sequence = TTCTGTGTTACAGCTTCTTAC SNP = C/T SNP structure (UNICODE) = AAATGTAATAYGAAATAATGA Parent 1 SNP sequence = AAATGTAATACGAAATAATGA Parent 2 SNP sequence = AAATGTAATATGAAATAATGA SNP = T/G SNP structure (UNICODE) = CCACATACCCKATCCAGAACA Parent 1 SNP sequence = CCACATACCCTATCCAGAACA Parent 2 SNP sequence = CCACATACCCGATCCAGAACA SNP structure (UNICODE) = CTTATAAAAGRAAAACTCATA Parent 1 SNP sequence = CTTATAAAAGGAAAACTCATA Parent 2 SNP sequence = CTTATAAAAGAAAAACTCATA SNP structure (UNICODE) = TCACCTTGATYTCAAGAATGT Parent 1 SNP sequence = TCACCTTGATCTCAAGAATGT Parent 2 SNP sequence = TCACCTTGATTTCAAGAATGT SNP = T/C SNP structure (UNICODE) = ATATCATTCGYGGGCACAAAA Parent 1 SNP sequence = ATATCATTCGTGGGCACAAAA Parent 2 SNP sequence = ATATCATTCGCGGGCACAAAA
Probe for Locus	bah22c08
Locus	k03799
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - ATCCGTTGGCAAGACAAGAC Right 5' - GTGCCTACCAGCCTCATCAT
Sequence	AL500151
PCR size	367