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GrainGenes Marker Report: k03988

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Locus	k03988
Type	CAPS
Chromosome	1H
Map	Hv-HNxH602-1H 313.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bah30o13
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 6 ] Restriction enzyme used for CAPS analysis = AluI SNP = T/- SNP structure (UNICODE) = CAAGCCCAGCT/-CCAAACTACC Parent 1 SNP sequence = CAAGCCCAGCTCCAAACTACC Parent 2 SNP sequence = CAAGCCCAGC-CCAAACTACC Recognized sequence for CAPs locus = AGCT
Probe for Locus	bah30o13
Locus	k03988
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - AGGTGGCAAACATTTAACGG Right 5' - TATGTGATGGGAGGTGCCTT
PCR size	431