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GrainGenes Marker Report: k04075

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Locus	k04075
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 75.2
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bah37k03
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = G/A SNP structure (UNICODE) = ATCTCTCTCARTTTTCCTCCA Parent 1 SNP sequence = ATCTCTCTCAGTTTTCCTCCA Parent 2 SNP sequence = ATCTCTCTCAATTTTCCTCCA SNP = T/G SNP structure (UNICODE) = TGTTTGCCGGKTCAGCTTTGT Parent 1 SNP sequence = TGTTTGCCGGTTCAGCTTTGT Parent 2 SNP sequence = TGTTTGCCGGGTCAGCTTTGT
Probe for Locus	bah37k03
Locus	k04075
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = DNAJ homologue [Oryza sativa]
Type	PCR
PCR primers	Left 5' - GCTCGTCGTTCAAACAAACA Right 5' - GCTCAGCTGGGTGAACTACC
Sequence	AV947080
PCR size	437