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GrainGenes Marker Report: k04139

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Locus	k04139
Type	SNP
Chromosome	4H
Map	Hv-HNxH602-4H 178.7
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bah44n03
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = A/G SNP structure (UNICODE) = GCTTGTCACGRAGGTGCGGCT Parent 1 SNP sequence = GCTTGTCACGAAGGTGCGGCT Parent 2 SNP sequence = GCTTGTCACGGAGGTGCGGCT SNP = G/A SNP structure (UNICODE) = GCATCTTGGCRTCGTTGCAGA Parent 1 SNP sequence = GCATCTTGGCGTCGTTGCAGA Parent 2 SNP sequence = GCATCTTGGCATCGTTGCAGA
Probe for Locus	bah44n03
Locus	k04139
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative protein tyrosine-serine-threonine kinase [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - GTGCATACCAGCCCTAGGAA Right 5' - AGACATGACCTTGGGGACTG
Sequence	BJ483409
PCR size	391