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GrainGenes Marker Report: k04212

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Locus	k04212
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 73.3
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bah45h23
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 11 ] SNP = T/G SNP structure (UNICODE) = AAGGTTTACGKTATGCTATGC Parent 1 SNP sequence = AAGGTTTACGTTATGCTATGC Parent 2 SNP sequence = AAGGTTTACGGTATGCTATGC SNP structure (UNICODE) = ATTGACCTTGKTCTTCTTCAG Parent 1 SNP sequence = ATTGACCTTGTTCTTCTTCAG Parent 2 SNP sequence = ATTGACCTTGGTCTTCTTCAG SNP = A/T SNP structure (UNICODE) = CTGTGCAGATWATGACTTGGC Parent 1 SNP sequence = CTGTGCAGATAATGACTTGGC Parent 2 SNP sequence = CTGTGCAGATTATGACTTGGC
Probe for Locus	bah45h23
Locus	k04212
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = protein F10K1.23 [imported] - Arabidopsis thaliana gb AAF82214.1 F10K1.23 [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - TCACTGCCATTTGGCTAACA Right 5' - TGACACCACGAAACCTACCA
Sequence	BJ483486
PCR size	354