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GrainGenes Marker Report: k04290

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Locus	k04290
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 120.5
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bah47h17
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = T/A SNP structure (UNICODE) = CATCCACCATWACAAGACAAG Parent 1 SNP sequence = CATCCACCATTACAAGACAAG Parent 2 SNP sequence = CATCCACCATAACAAGACAAG SNP = G/A SNP structure (UNICODE) = CACTCCCTCARGAACTCAACA Parent 1 SNP sequence = CACTCCCTCAGGAACTCAACA Parent 2 SNP sequence = CACTCCCTCAAGAACTCAACA
Probe for Locus	bah47h17
Locus	k04290
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = importin-beta1 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - AAATCCCAGTTCCTCTGCCT Right 5' - ACCTCGGGATCACTCCTTCT
Sequence	BJ552095
PCR size	401