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GrainGenes Marker Report: k04332

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Locus	k04332
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 133.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bah52a21
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 12 ] SNP = T/A SNP structure (UNICODE) = CTGAAATTATWTTACTAACAT Parent 1 SNP sequence = CTGAAATTATTTTACTAACAT Parent 2 SNP sequence = CTGAAATTATATTACTAACAT SNP = A/G SNP structure (UNICODE) = CCATAGATTTRGGTGACTGGA Parent 1 SNP sequence = CCATAGATTTAGGTGACTGGA Parent 2 SNP sequence = CCATAGATTTGGGTGACTGGA SNP = C/A SNP structure (UNICODE) = ATAATATTAAMACCTTGATAT Parent 1 SNP sequence = ATAATATTAACACCTTGATAT Parent 2 SNP sequence = ATAATATTAAAACCTTGATAT
Probe for Locus	bah52a21
Locus	k04332
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = probable amino acid acetyltransferase [imported] - Arabidopsis thaliana
Type	PCR
PCR primers	Left 5' - GTGGCTGGTACTCCACCACT Right 5' - CGTGGATCACTCTATCGTGC
Sequence	BJ484572
PCR size	421