Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: k04368

[Submit comment/correction]

Locus	k04368
Type	SNP
Chromosome	4H
Map	Hv-HNxH602-4H 135.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bah52d09
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 22 ] SNP = A/T SNP structure (UNICODE) = GGCTGTAATTWGGATCTGCTC Parent 1 SNP sequence = GGCTGTAATTAGGATCTGCTC Parent 2 SNP sequence = GGCTGTAATTTGGATCTGCTC SNP = C/T SNP structure (UNICODE) = CAGACGATCTYTGAGAGTGTC Parent 1 SNP sequence = CAGACGATCTCTGAGAGTGTC Parent 2 SNP sequence = CAGACGATCTTTGAGAGTGTC SNP = T/C SNP structure (UNICODE) = ACAGGGATTTYACAGACGATC Parent 1 SNP sequence = ACAGGGATTTTACAGACGATC Parent 2 SNP sequence = ACAGGGATTTCACAGACGATC SNP structure (UNICODE) = GGATCTGCTCYTTGTCTCTTG Parent 1 SNP sequence = GGATCTGCTCTTTGTCTCTTG Parent 2 SNP sequence = GGATCTGCTCCTTGTCTCTTG SNP = T/G SNP structure (UNICODE) = TCTGGGGCACKTGGACTAGCT Parent 1 SNP sequence = TCTGGGGCACTTGGACTAGCT Parent 2 SNP sequence = TCTGGGGCACGTGGACTAGCT SNP structure (UNICODE) = AGTTCAGGTGYAATTTTGGGT Parent 1 SNP sequence = AGTTCAGGTGCAATTTTGGGT Parent 2 SNP sequence = AGTTCAGGTGTAATTTTGGGT
Probe for Locus	bah52d09
Locus	k04368
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - CCTTAATGAATTCCCGGTCA Right 5' - CCCTCTTTTTGCTTCAAACG
Sequence	BJ484610
PCR size	471