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GrainGenes Marker Report: k04372

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Locus	k04372
Type	SNP
Chromosome	3H
Map	Hv-HNxH602-3H 174.7
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bah49o05
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 16 ] SNP = A/C SNP structure (UNICODE) = GTTCATTGATMGTGTAAAATT Parent 1 SNP sequence = GTTCATTGATAGTGTAAAATT Parent 2 SNP sequence = GTTCATTGATCGTGTAAAATT SNP = T/A SNP structure (UNICODE) = CAAGGTGCGGWGGACATCAGC Parent 1 SNP sequence = CAAGGTGCGGTGGACATCAGC Parent 2 SNP sequence = CAAGGTGCGGAGGACATCAGC SNP = C/T SNP structure (UNICODE) = CTGTCTGCCGYCGGACATGAA Parent 1 SNP sequence = CTGTCTGCCGCCGGACATGAA Parent 2 SNP sequence = CTGTCTGCCGTCGGACATGAA SNP = A/T SNP structure (UNICODE) = GACCATCAGAWATGGAGTGTT Parent 1 SNP sequence = GACCATCAGAAATGGAGTGTT Parent 2 SNP sequence = GACCATCAGATATGGAGTGTT
Probe for Locus	bah49o05
Locus	k04372
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = fructose-1,6-bisphosphatase [Pisum sativum]
Type	PCR
PCR primers	Left 5' - GATCTGAAACCAGGAGACGC Right 5' - GGCTCGATATGGGTGACAGT
Sequence	AV934657
PCR size	391