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GrainGenes Marker Report: k04469

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Locus	k04469
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 134.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bah54j22
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 19 ] SNP = C/T SNP structure (UNICODE) = TAACTGACTTYTACAAGAAAA Parent 1 SNP sequence = TAACTGACTTCTACAAGAAAA Parent 2 SNP sequence = TAACTGACTTTTACAAGAAAA SNP = A/T SNP structure (UNICODE) = AGATTATTGAWCGGACCACAT Parent 1 SNP sequence = AGATTATTGAACGGACCACAT Parent 2 SNP sequence = AGATTATTGATCGGACCACAT SNP structure (UNICODE) = GCCAAAACTAWGAGAGGACGA Parent 1 SNP sequence = GCCAAAACTAAGAGAGGACGA Parent 2 SNP sequence = GCCAAAACTATGAGAGGACGA SNP = T/C SNP structure (UNICODE) = GTTGGTGTCAYAGAAGATTAT Parent 1 SNP sequence = GTTGGTGTCATAGAAGATTAT Parent 2 SNP sequence = GTTGGTGTCACAGAAGATTAT SNP = A/C SNP structure (UNICODE) = TTTTGGAGCAMTGACACGAGC Parent 1 SNP sequence = TTTTGGAGCAATGACACGAGC Parent 2 SNP sequence = TTTTGGAGCACTGACACGAGC
Probe for Locus	bah54j22
Locus	k04469
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - TTACAGCGAACGAAGCATTG Right 5' - GGAAGAAGGGCAAGAAGAGC
Sequence	BJ485222
PCR size	396