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GrainGenes Marker Report: k04630

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Locus	k04630
Type	SNP
Chromosome	3H
Map	Hv-HNxH602-3H 74.7
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bah62n16
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 11 ] SNP = T/C SNP structure (UNICODE) = ACATATATTAYTGGCTGCTTT Parent 1 SNP sequence = ACATATATTATTGGCTGCTTT Parent 2 SNP sequence = ACATATATTACTGGCTGCTTT SNP = C/T SNP structure (UNICODE) = TATGGATCTAYGGCGCAGCTT Parent 1 SNP sequence = TATGGATCTACGGCGCAGCTT Parent 2 SNP sequence = TATGGATCTATGGCGCAGCTT SNP structure (UNICODE) = ATCAGCGTGGYTGCTGATGAC Parent 1 SNP sequence = ATCAGCGTGGCTGCTGATGAC Parent 2 SNP sequence = ATCAGCGTGGTTGCTGATGAC
Probe for Locus	bah62n16
Locus	k04630
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = contains similarity to enolase-phosphatase~gene_id:K19P17.1 [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - TGGTTTTGGGATGTTTGGTT Right 5' - TCCTGGCTTATGCAGGAGAT
Sequence	BJ486778
PCR size	485