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GrainGenes Marker Report: k04662

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Locus	k04662
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 184.2
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bah61h20
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 11 ] SNP = A/G SNP structure (UNICODE) = CGTTCATAACRCATCACCATT Parent 1 SNP sequence = CGTTCATAACACATCACCATT Parent 2 SNP sequence = CGTTCATAACGCATCACCATT SNP = G/A SNP structure (UNICODE) = CGTGCCTAACRACCTGAAACG Parent 1 SNP sequence = CGTGCCTAACGACCTGAAACG Parent 2 SNP sequence = CGTGCCTAACAACCTGAAACG SNP structure (UNICODE) = TCTGAATGATRGTGTGAAAGA Parent 1 SNP sequence = TCTGAATGATGGTGTGAAAGA Parent 2 SNP sequence = TCTGAATGATAGTGTGAAAGA
Probe for Locus	bah61h20
Locus	k04662
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = unknown [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - CCACTCATTAGCGTGCAGAA Right 5' - GAAGCCTTCGTCAAGTCAGG
Sequence	BJ486495
PCR size	473