Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: k04672

[Submit comment/correction]

Locus	k04672
Type	SNP
Chromosome	3H
Map	Hv-HNxH602-3H 88.5
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bah60o22
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 11 ] SNP = G/A SNP structure (UNICODE) = CCTTCCGACARATTCAACACC Parent 1 SNP sequence = CCTTCCGACAGATTCAACACC Parent 2 SNP sequence = CCTTCCGACAAATTCAACACC SNP = C/T SNP structure (UNICODE) = ATTCGCCGTTYACTGCGTCAT Parent 1 SNP sequence = ATTCGCCGTTCACTGCGTCAT Parent 2 SNP sequence = ATTCGCCGTTTACTGCGTCAT SNP structure (UNICODE) = AGCATATCTCYTCTTCGGGTC Parent 1 SNP sequence = AGCATATCTCCTCTTCGGGTC Parent 2 SNP sequence = AGCATATCTCTTCTTCGGGTC
Probe for Locus	bah60o22
Locus	k04672
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - GAGTGCCCCACCAAAGAATA Right 5' - GAGCACGGCTGTTCCTTATC
PCR size	406