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GrainGenes Marker Report: k04772

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Locus	k04772
Type	CAPS
Chromosome	5H
Map	Hv-HNxH602-5H 204.6
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	basd13j03
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 6 ] Restriction enzyme used for CAPS analysis = SalI SNP = T/G SNP structure (UNICODE) = AATCCTGGAGKCGACTGATGT Parent 1 SNP sequence = AATCCTGGAGTCGACTGATGT Parent 2 SNP sequence = AATCCTGGAGGCGACTGATGT Recognized sequence for CAPs locus = GTCGAC
Probe for Locus	basd13j03
Locus	k04772
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - AAGTCTTTCAGTGGCGGAGA Right 5' - GGTTCTGGCGATGCTATTGT
Sequence	AV928002
PCR size	384