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GrainGenes Marker Report: k04830

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Locus	k04830
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 79.3
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	basd15f08
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = T/A SNP structure (UNICODE) = ATAATATAAGWGTGTTTTTGT Parent 1 SNP sequence = ATAATATAAGTGTGTTTTTGT Parent 2 SNP sequence = ATAATATAAGAGTGTTTTTGT SNP = G/A SNP structure (UNICODE) = GCTTCTTGACRTTGGTTCGGT Parent 1 SNP sequence = GCTTCTTGACGTTGGTTCGGT Parent 2 SNP sequence = GCTTCTTGACATTGGTTCGGT
Probe for Locus	basd15f08
Locus	k04830
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = 26S proteasome regulatory particle triple-A ATPase subunit3 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - GGTGCCCACAGAGAACATTT Right 5' - TATGATTACCAGCAAGGGGC
Sequence	AV920408
PCR size	464