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GrainGenes Marker Report: k04898

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Locus	k04898
Type	SNP
Chromosome	6H
Map	Hv-HNxH602-6H 197
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	basd17d11
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = C/T SNP structure (UNICODE) = ACCACCTCAAYAGAACGCGCA Parent 1 SNP sequence = ACCACCTCAACAGAACGCGCA Parent 2 SNP sequence = ACCACCTCAATAGAACGCGCA SNP = A/C SNP structure (UNICODE) = ATGCTTGAGAMTTGTAACCGT Parent 1 SNP sequence = ATGCTTGAGAATTGTAACCGT Parent 2 SNP sequence = ATGCTTGAGACTTGTAACCGT
Probe for Locus	basd17d11
Locus	k04898
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = N3 like protein [Medicago truncatula]
Type	PCR
PCR primers	Left 5' - ATCTACTGGCCGATGACCTG Right 5' - GGGTGTCGCTGATGTCCTAT
Sequence	AV929944
PCR size	467