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GrainGenes Marker Report: k04922

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Locus	k04922
Type	SNP
Chromosome	6H
Map	Hv-HNxH602-6H 184.1
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	basd17f18
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 22 ] SNP = G/A SNP structure (UNICODE) = TATATATACCRTAGTTTGTAA Parent 1 SNP sequence = TATATATACCGTAGTTTGTAA Parent 2 SNP sequence = TATATATACCATAGTTTGTAA SNP = A/T SNP structure (UNICODE) = ATCCCTAAAAWGGGATAATTT Parent 1 SNP sequence = ATCCCTAAAAAGGGATAATTT Parent 2 SNP sequence = ATCCCTAAAATGGGATAATTT SNP = G/C SNP structure (UNICODE) = CACCGCCGCTSTTCCCCGCAG Parent 1 SNP sequence = CACCGCCGCTGTTCCCCGCAG Parent 2 SNP sequence = CACCGCCGCTCTTCCCCGCAG SNP structure (UNICODE) = GAAATACTCARAAATAAACCA Parent 1 SNP sequence = GAAATACTCAGAAATAAACCA Parent 2 SNP sequence = GAAATACTCAAAAATAAACCA SNP = T/C SNP structure (UNICODE) = GAGATTGTGTYGACAGAAATA Parent 1 SNP sequence = GAGATTGTGTTGACAGAAATA Parent 2 SNP sequence = GAGATTGTGTCGACAGAAATA SNP structure (UNICODE) = AACAGGTGACYAATGAGATTG Parent 1 SNP sequence = AACAGGTGACTAATGAGATTG Parent 2 SNP sequence = AACAGGTGACCAATGAGATTG
Probe for Locus	basd17f18
Locus	k04922
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - CGAGCAAGCCCATTGAGTAT Right 5' - CCCACCAACGTACTACGAAGA
Sequence	AV929983
PCR size	454