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GrainGenes Marker Report: k04925

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Locus	k04925
Type	SNP
Chromosome	7H
Map	Hv-HNxH602-7H 90.6
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	basd18g06
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = A/T SNP structure (UNICODE) = TCGCTCTAGGWCTAGGACTAG Parent 1 SNP sequence = TCGCTCTAGGACTAGGACTAG Parent 2 SNP sequence = TCGCTCTAGGTCTAGGACTAG SNP = G/A SNP structure (UNICODE) = ACTAGGACAGRATGGCCGGGT Parent 1 SNP sequence = ACTAGGACAGGATGGCCGGGT Parent 2 SNP sequence = ACTAGGACAGAATGGCCGGGT
Probe for Locus	basd18g06
Locus	k04925
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = OSJNBa0038J17.23 [Oryza sativa (japonica cultivar-group)] dbj BAA94239.1 unnamed protein product [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - GAGGCAAATTAACCCCCAAT Right 5' - AGGAGCTGCTCGATGGTGTA
Sequence	AV926185
PCR size	351