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GrainGenes Marker Report: k05129

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Locus	k05129
Type	SNP
Chromosome	3H
Map	Hv-HNxH602-3H 110
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	basd23m17
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = A/C SNP structure (UNICODE) = CTGCATTAAAMAATTGAGTGT Parent 1 SNP sequence = CTGCATTAAAAAATTGAGTGT Parent 2 SNP sequence = CTGCATTAAACAATTGAGTGT SNP = A/G SNP structure (UNICODE) = CATTCGGAACRTACCAACCAC Parent 1 SNP sequence = CATTCGGAACATACCAACCAC Parent 2 SNP sequence = CATTCGGAACGTACCAACCAC
Probe for Locus	basd23m17
Locus	k05129
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = B1144G04.20 [Oryza sativa (japonica cultivar-group)] dbj BAB90029.1 B1144G04.20 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - GCTGCTTCTTTCAGGCTTTG Right 5' - CGGATTATGGCCTGATCACT
Sequence	BJ450649
PCR size	362