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GrainGenes Marker Report: k05191

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Locus	k05191
Type	SNP
Chromosome	6H
Map	Hv-HNxH602-6H 207.3
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	basd27k17
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 12 ] SNP = G/T SNP structure (UNICODE) = GTGAGCGATAKGCATGAGCAT Parent 1 SNP sequence = GTGAGCGATAGGCATGAGCAT Parent 2 SNP sequence = GTGAGCGATATGCATGAGCAT SNP = G/C SNP structure (UNICODE) = AGGATCACCCSGGCTTTCCTC Parent 1 SNP sequence = AGGATCACCCGGGCTTTCCTC Parent 2 SNP sequence = AGGATCACCCCGGCTTTCCTC SNP = C/G SNP structure (UNICODE) = ACCTCCATGTSTGACCTGACA Parent 1 SNP sequence = ACCTCCATGTCTGACCTGACA Parent 2 SNP sequence = ACCTCCATGTGTGACCTGACA
Probe for Locus	basd27k17
Locus	k05191
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = OSJNBb0006L01.5 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - GGACAGCGAGCAACAGTACA Right 5' - TGAGGCGGAGAAGAAGAAAG
Sequence	AV928263
PCR size	360