Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: k05193

[Submit comment/correction]

Locus	k05193
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 102.2
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	basd27p03
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 12 ] SNP = T/C SNP structure (UNICODE) = GTGGAGGAACYTACAACCTGG Parent 1 SNP sequence = GTGGAGGAACTTACAACCTGG Parent 2 SNP sequence = GTGGAGGAACCTACAACCTGG SNP = A/G SNP structure (UNICODE) = AGAAATACCCRTTTCTGGCAA Parent 1 SNP sequence = AGAAATACCCATTTCTGGCAA Parent 2 SNP sequence = AGAAATACCCGTTTCTGGCAA SNP = G/A SNP structure (UNICODE) = CTGCACGCTARGTGGAGGAAC Parent 1 SNP sequence = CTGCACGCTAGGTGGAGGAAC Parent 2 SNP sequence = CTGCACGCTAAGTGGAGGAAC
Probe for Locus	basd27p03
Locus	k05193
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - CAGGTCCATGATTGATTGATTG Right 5' - TGTGAATGCAGATGCAAGGT
Sequence	AL501626
PCR size	366