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GrainGenes Marker Report: k05258

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Locus	k05258
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 26.7
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	basd27b10
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = C/A SNP structure (UNICODE) = GGAGCGACGAMCTTGATCTTC Parent 1 SNP sequence = GGAGCGACGACCTTGATCTTC Parent 2 SNP sequence = GGAGCGACGAACTTGATCTTC SNP = A/G SNP structure (UNICODE) = GGCGTATCCCRAGAGTACCCA Parent 1 SNP sequence = GGCGTATCCCAAGAGTACCCA Parent 2 SNP sequence = GGCGTATCCCGAGAGTACCCA
Probe for Locus	basd27b10
Locus	k05258
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = actin [Hordeum vulgare]
Type	PCR
PCR primers	Left 5' - ACAACCTTCCTTGGGGACTT Right 5' - CACCATGGTCAACAAGATGG
Sequence	BJ467670
PCR size	451