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GrainGenes Marker Report: k05281

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Locus	k05281
Type	SNP
Chromosome	6H
Map	Hv-HNxH602-6H 128.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	basd2o16
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 16 ] SNP = C/G SNP structure (UNICODE) = TCAAAACAAASAAGCTCCGTC Parent 1 SNP sequence = TCAAAACAAACAAGCTCCGTC Parent 2 SNP sequence = TCAAAACAAAGAAGCTCCGTC SNP = G/C SNP structure (UNICODE) = GGACAGGGTASAAGGGTAGAG Parent 1 SNP sequence = GGACAGGGTAGAAGGGTAGAG Parent 2 SNP sequence = GGACAGGGTACAAGGGTAGAG SNP = T/A SNP structure (UNICODE) = TTGAAGGGGAWCTGCTTCTTG Parent 1 SNP sequence = TTGAAGGGGATCTGCTTCTTG Parent 2 SNP sequence = TTGAAGGGGAACTGCTTCTTG SNP = A/T SNP structure (UNICODE) = CTTGAAACGGWTCCGGAACAG Parent 1 SNP sequence = CTTGAAACGGATCCGGAACAG Parent 2 SNP sequence = CTTGAAACGGTTCCGGAACAG
Probe for Locus	basd2o16
Locus	k05281
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - ACAGTTATTTGAGGGCACGG Right 5' - TACTGAGGGTTAAGCGTGGG
Sequence	AV927630
PCR size	494